CDS
| Accession Number | TCMCG007C26815 |
| gbkey | CDS |
| Protein Id | XP_009140077.1 |
| Location | complement(join(10777669..10777818,10777899..10778018,10778111..10778279,10778375..10779338,10779416..10779734)) |
| Gene | LOC103864065 |
| GeneID | 103864065 |
| Organism | Brassica rapa |
Protein
| Length | 573aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_009141829.3 |
| Definition | 20S-pre-rRNA D-site endonuclease nob1 [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | O |
| Description | Nin one binding (NOB1) Zn-ribbon like (InterPro IPR014881), D-site 20S pre-rRNA nuclease (InterPro IPR017117) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] ko03051 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11883
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGATCCGAAGCCAGCATCGATGTGGAGTTCCATAGTGAAGAAAGATCCCCCCGCAAAGCCTCCGACCACCGACGTAGCTCCGTCGGCGATTCTCGGCATGGTCGGAAACTGCAAATCCACAAAGGGAATATCCGTGGCGGTCGTCGACGCCAACGCCGTCATCGACGGTAGCCAGAGCTTAACCAACTTCGCCGACAAATTCGTAACCGTCCCAGAAGTACTCTCGGAGATTCGCGACCCTAACTCTCGCCGTCGTCTCGAGTTCATCCCTTTCGTTATCGAAACCATGGAGCCTTCTCCTGAATCCCTCAGTAAAGTTATTAAATTTGCTAAAGCTACTGGTGATTTGCAAACACTCTCTGATGTTGATCTTAAGTTGATTGCTTTGACGTACACGCTTGAGGCTGAGGTTCATGGGACCAAGAATCTTAGAGATGTTCCTCCGCCTATTCAAACTGTTAGGGTGAAGAGATTACCTGAGAAGGAGCTTCCTGGCTGGGGATCTAATGTGGCTAACTTGGAGGAGTGGGAGGCGCTTGAGAACGAGACTGAGGAGAAATCGAATACTACTTCCAAGATCCTTCCGCTTAAAGACCTTAACATGAACATTCTTCCTCCCTCGGACAGCTGTTCTGAGGTTGGTGATGTTGCGTCTCAGACTGAGGGTCAAGAGGAGGATGAGGAGGAAGGCGGGAGGAGGCAGAAGAGGTACCCGCCTAAGAAAACGGAGGTGAAGATTGAGGGTAAGATGGTGGTGGAAGGAATAGATGCATCGCAGGGGGGTAATGATGATGATGAAGATGGTGGTGGTGAATGGAGGCCTGCGGTTAGTAGCAGTACTCACAGGAAGTTCCTTAGGAGAAAGGCCAAGTGGGAACATTACAATGCCTTGGCTGAGAAAGAATTTCAGAAAGATCAAGAAGCTGACAAAGCTGGTGAAAAGAAGTGTGCAAAAGATAGCGGAAAGGATGATGAAGAGCTTTCGTCCATCTTGAACGATATGAGGGTGGAGGAAGACTCATTAAAGGCTCTCCAAGAAGAACCTGAAGAGACGAATGGTGAGGATGATACTGAAGTCGACATTGCTAGTGAGGGTGGTGATACCTTTGAGGCATCATCGATGGCAGATGATGGTAGCAGCGAGCAGAGTTGGTCGTTGAGAGCCTTATCTGAGTCCAGTGTAGCTTGTATAAGCGGTGACTACGCGATGCAAAATGTTATTATTCAAATGGGTTTGCGTTTGCTTGCACCCGGAGGTATGCAAATTCGCCAACTAAACAGGTGGGTGTTGAAATGCCATGCTTGCTACACAGTAACTCCTGAAATTGGAAGAATCTTCTGTCCCAAGTGCGGTAATGGCGGCACTCTGCGCAAAGTAGCGGTTACAATAGGCGAGAATGGCACCATCATAGCTGCACGTAAACCACGTGTAACACTTCGAGGGACTAAATTTTCGATACCGATGCCTAAAAGCGGAAGAGACGCAATCACCAAGAATCTGGTTCTAAGGGAAGATCAACTTCCTCAAAAGTACCTCCATCCGAAGACCAAGAAGAAAGCAAGCAAAGCGGGAGATGAGTATTTTATATCAGACGATGTGTTCATGAACCATCACAGTGATAAAAAGGCACCATTGCAGCCTCCAGTGAGAAAAGCTATGGCGGTTTTCAGTCAGAAACGGAACCCTAATGATAACCATTACTCGCGTTCTATGCACTGA |
| Protein: MDPKPASMWSSIVKKDPPAKPPTTDVAPSAILGMVGNCKSTKGISVAVVDANAVIDGSQSLTNFADKFVTVPEVLSEIRDPNSRRRLEFIPFVIETMEPSPESLSKVIKFAKATGDLQTLSDVDLKLIALTYTLEAEVHGTKNLRDVPPPIQTVRVKRLPEKELPGWGSNVANLEEWEALENETEEKSNTTSKILPLKDLNMNILPPSDSCSEVGDVASQTEGQEEDEEEGGRRQKRYPPKKTEVKIEGKMVVEGIDASQGGNDDDEDGGGEWRPAVSSSTHRKFLRRKAKWEHYNALAEKEFQKDQEADKAGEKKCAKDSGKDDEELSSILNDMRVEEDSLKALQEEPEETNGEDDTEVDIASEGGDTFEASSMADDGSSEQSWSLRALSESSVACISGDYAMQNVIIQMGLRLLAPGGMQIRQLNRWVLKCHACYTVTPEIGRIFCPKCGNGGTLRKVAVTIGENGTIIAARKPRVTLRGTKFSIPMPKSGRDAITKNLVLREDQLPQKYLHPKTKKKASKAGDEYFISDDVFMNHHSDKKAPLQPPVRKAMAVFSQKRNPNDNHYSRSMH |